Stem-loop gma-MIR403a

Accession

MI0018631

Description

Glycine max gma-MIR403a precursor miRNA

Literature search

4 open access papers mention gma-MIR403a
(16 sentences)

Sequence

106500 reads, 181.0 reads per million, 177 experiments

aaauugcaGGUUCGUGCGUGAAUCUAACGaaaguuucucguucucuccauuccacuucugcgUUAGAUUCACGCACAAACUUGUcauuu
((((.(((((((.((((((((((((((((.((((...................))))...)))))))))))))))).))))))).))))

Structure

    u       C                --a    uucucguu 
aaau gcaGGUU GUGCGUGAAUCUAACG   aagu        c
|||| ||||||| ||||||||||||||||   ||||        u
uuua UGUUCAA CACGCACUUAGAUUgc   uuca        c
    c       A                guc    ccuuaccu 

Annotation confidence High

Genome context

chr2: 1041992-1042080 [+]

Mature gma-miR403a-5p

• Accession: MIMAT0054228
• Description: Glycine max gma-miR403a-5p mature miRNA
• Sequence: 9 - GGUUCGUGCGUGAAUCUAACG - 29
• Evidence: experimental ; unknown

Mature gma-miR403a-3p

• Accession: MIMAT0021613
• Description: Glycine max gma-miR403a-3p mature miRNA
• Sequence: 63 - UUAGAUUCACGCACAAACUUGU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307