Stem-loop asu-mir-5362

Accession

MI0018613

Description

Ascaris suum asu-mir-5362 precursor miRNA

Sequence

ugugcaguuAAAUCUCGUCCGGUAGUAUAUGCgaguugaaaagcAUUGCAACCGGUGGAGAUUCCAcugacuucucu
.((.((((..((((((..(((((.(((.((((..........))))))).)))))..))))))..))))))......

Structure

-----u  g    uA      GU     A   U    gagu 
      gu cagu  AAUCUC  CCGGU GUA AUGC    u
      || ||||  ||||||  ||||| ||| ||||     
      ca gucA  UUAGAG  GGCCA CGU UAcg    g
ucucuu  -    CC      GU     A   -    aaaa 

Annotation confidence Low

Genome context

Unknown

Mature asu-miR-5362-5p

• Accession: MIMAT0021586
• Description: Ascaris suum asu-miR-5362-5p mature miRNA
• Sequence: 10 - AAAUCUCGUCCGGUAGUAUAUGC - 32
• Evidence: experimental ; Illumina [1]

Mature asu-miR-5362-3p

• Accession: MIMAT0021587
• Description: Ascaris suum asu-miR-5362-3p mature miRNA
• Sequence: 45 - AUUGCAACCGGUGGAGAUUCCA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477