Stem-loop asu-mir-5351

Accession

MI0018600

Description

Ascaris suum asu-mir-5351 precursor miRNA

Sequence

guaccaaguCAGGUUUUACUAAUGACCAAAUUguuucaagcgaaUUUGGCACAUGUAAUACCUGCCuugguugcu
((((((((.(((((.((((...((.((((((((((...))).)))))))))...)))).))))).))))).))).

Structure

-   -     u     U    UAA  A       -   u 
 gua ccaag CAGGU UUAC   UG CCAAAUU guu  
 ||| ||||| ||||| ||||   || ||||||| ||| c
 cgu gguuC GUCCA AAUG   AC GGUUUaa cga  
u   u     C     U    UAC  -       g   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-5351-5p

• Accession: MIMAT0021560
• Description: Ascaris suum asu-miR-5351-5p mature miRNA
• Sequence: 10 - CAGGUUUUACUAAUGACCAAAUU - 32
• Evidence: experimental ; Illumina [1]

Mature asu-miR-5351-3p

• Accession: MIMAT0021561
• Description: Ascaris suum asu-miR-5351-3p mature miRNA
• Sequence: 45 - UUUGGCACAUGUAAUACCUGCC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477