miRBase entry: asu-mir-36f

Stem-loop asu-mir-36f


Accession
MI0018593
Description
Ascaris suum asu-mir-36f precursor miRNA


Sequence

cuggagcgugACAUGGAUUCAGCUAUCUGUGGAguagugccuucaaaacaaauucuUCACCGGGCUGCAAUCCUUGUCAcgccggucu
(((..((((((((.((((((((((....((((((.(((.............)))))))))..))))).))))).)))))))))))...

Structure
---   ga        U     -     AUCU      u   gccuu 
   cug  gcgugACA GGAUU CAGCU    GUGGAg agu     c
   |||  |||||||| ||||| |||||    |||||| |||     a
   ggc  cgcACUGU CCUAA GUCGG    CACUuc uua     a
ucu   --        U     C     --GC      -   aacaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature asu-miR-36f-5p

Accession MIMAT0021546
Description Ascaris suum asu-miR-36f-5p mature miRNA
Sequence 11 - ACAUGGAUUCAGCUAUCUGUGGA - 33
Evidence experimental
Illumina [1]

Mature asu-miR-36f-3p

Accession MIMAT0021547
Description Ascaris suum asu-miR-36f-3p mature miRNA
Sequence 57 - UCACCGGGCUGCAAUCCUUGUCA - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21685128
    Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
    "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
    "Genome Res (2011) 21:1462-1477