Stem-loop asu-mir-36b

Accession

MI0018537

Description

Ascaris suum asu-mir-36b precursor miRNA

Sequence

guggccgauCGUGAGUGUUUGCGACGGUUAGCgucugguaucggugcUCACCGGGUGAACAUUCAUUAUcggcccauug
(.(((((((.((((((((((((..((((.((((.(((....))))))).)))).)))))))))))).))))))))....

Structure

---- u       C            GA    U    u   g 
    g ggccgau GUGAGUGUUUGC  CGGU AGCg cug u
    | ||||||| ||||||||||||  |||| |||| |||  
    c ccggcUA UACUUACAAGUG  GCCA Ucgu ggc a
guua -       U            -G    C    -   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-36b-5p

• Accession: MIMAT0021441
• Description: Ascaris suum asu-miR-36b-5p mature miRNA
• Sequence: 10 - CGUGAGUGUUUGCGACGGUUAGC - 32
• Evidence: experimental ; Illumina [1]

Mature asu-miR-36b-3p

• Accession: MIMAT0021442
• Description: Ascaris suum asu-miR-36b-3p mature miRNA
• Sequence: 48 - UCACCGGGUGAACAUUCAUUAU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477