Stem-loop asu-mir-81b

Accession

MI0018526

Description

Ascaris suum asu-mir-81b precursor miRNA

Sequence

uuguucucaaaACGGGUGUGCAUGCAGAUCAUGguguaauauagcucaUGAGAUCAUGCCACAUCUGUCUugaaagcca
..(((.((((.(((((((((((((.(..((((((.((......))))))))..))))).))))))))).)))).)))..

Structure

uu   c    a         -    C GA      u  aa 
  guu ucaa ACGGGUGUG CAUG A  UCAUGg gu  u
  ||| |||| ||||||||| |||| |  |||||| ||   
  cga aguU UGUCUACAC GUAC U  AGUacu cg  a
ac   a    C         C    - AG      -  au 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-81b-5p

• Accession: MIMAT0021419
• Description: Ascaris suum asu-miR-81b-5p mature miRNA
• Sequence: 12 - ACGGGUGUGCAUGCAGAUCAUG - 33
• Evidence: experimental ; Illumina [1]

Mature asu-miR-81b-3p

• Accession: MIMAT0021420
• Description: Ascaris suum asu-miR-81b-3p mature miRNA
• Sequence: 49 - UGAGAUCAUGCCACAUCUGUCU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477