miRBase entry: mtr-MIR5299

Stem-loop mtr-MIR5299


Accession
MI0018476
Description
Medicago truncatula mtr-MIR5299 precursor miRNA


Sequence

30385 reads, 217.0 reads per million, 111 experiments
uuggaaguagagaaggcaauaaauaaugaaugauauAAUAGGAAAAGUAACAUUAAUGAUUCAUUGGUAUUGUAAAGCGACAUacaauuu
......(((..(...((((((..((((((((.((.((((.(.........))))))).)))))))).))))))....)....))).....

Structure
uuggaa   --ga -aag      aa        g  a    A GAA 
      gua    g    gcaaua  uaaugaau au uAAU G   A
      |||    |    ||||||  |||||||| || |||| |   A
      caU    C    UGUUAU  GUUACUUA UA AUUA C   G
-uuuaa   ACAG GAAA      -G        G  -    - AAU 


Annotation confidence Low
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Genome context
chr8: 17057327-17057416 [-]

Database links

Mature mtr-miR5299-5p

Accession MIMAT0055235
Description Medicago truncatula mtr-miR5299-5p mature miRNA
Sequence 37 - AAUAGGAAAAGUAACAUUAAUGAU - 60
Evidence experimental
unknown

Mature mtr-miR5299-3p

Accession MIMAT0021373
Description Medicago truncatula mtr-miR5299-3p mature miRNA
Sequence 60 - UUCAUUGGUAUUGUAAAGCGACAU - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010