miRBase entry: mtr-MIR5298b

Stem-loop mtr-MIR5298b


Accession
MI0018473
Description
Medicago truncatula mtr-MIR5298b precursor miRNA


Sequence

9035 reads, 79.0 reads per million, 111 experiments
uUAGGUUUUCUUCAUUUUCUUCUGggauuauuuuuguugaagauUGAUGGAGAUGAUAUGAAGAUGAAaaggacgauaaa
....(((((.(((((((((.......((((((((((((((...))))))))))))))..))))))))).)))))......

Structure
--uUAG     C         UUCUGgg              a 
      GUUUU UUCAUUUUC       auuauuuuuguuga  
      ||||| |||||||||       |||||||||||||| g
      cagga AAGUAGAAG       UAGUAGAGGUAGUu  
aaauag     a         -----UA              a 


Annotation confidence Low
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Genome context
chr7: 24224436-24224515 [+]

Database links

Mature mtr-miR5298b-5p

Accession MIMAT0055232
Description Medicago truncatula mtr-miR5298b-5p mature miRNA
Sequence 2 - UAGGUUUUCUUCAUUUUCUUCUG - 24
Evidence experimental
unknown

Mature mtr-miR5298b-3p

Accession MIMAT0021370
Description Medicago truncatula mtr-miR5298b-3p mature miRNA
Sequence 45 - UGAUGGAGAUGAUAUGAAGAUGAA - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010