miRBase entry: mtr-MIR5295b

Stem-loop mtr-MIR5295b


Accession
MI0018467
Description
Medicago truncatula mtr-MIR5295b precursor miRNA


Sequence

12003 reads, 96.0 reads per million, 111 experiments
uuacuuuuauuuucuuuguugucguuuccagggccgucccuaAGAAUUCGGAGGCUCGGCUCUGGGAAUGAAAAGAGGCcagugauaaa
......(((((..((((....(((((((((((((((..(((..(....)..)))..)))))))))))))))...))))..)))))....

Structure
uuacuu     uu    guug               uc   aA A 
      uuauu  cuuu    ucguuuccagggccg  ccu  G A
      |||||  ||||    |||||||||||||||  |||  |  
      aguga  GGAG    AGUAAGGGUCUCGGC  GGA  C U
--aaau     cC    -AAA               UC   GG U 


Annotation confidence Low
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Genome context
chr4: 29869487-29869575 [-]

Database links

Mature mtr-miR5295b-5p

Accession MIMAT0055226
Description Medicago truncatula mtr-miR5295b-5p mature miRNA
Sequence 43 - AGAAUUCGGAGGCUCGGCUCUGG - 65
Evidence experimental
unknown

Mature mtr-miR5295b-3p

Accession MIMAT0021364
Description Medicago truncatula mtr-miR5295b-3p mature miRNA
Sequence 56 - UCGGCUCUGGGAAUGAAAAGAGGC - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010