miRBase entry: mtr-MIR5292b

Stem-loop mtr-MIR5292b


Accession
MI0018461
Description
Medicago truncatula mtr-MIR5292b precursor miRNA


Sequence

28637 reads, 243.0 reads per million, 111 experiments
ucccaaacaaguucuuuuauuuuuuGAAUCGUUUCAAACAAGUCauuuuaaaggaugaugaugauGAUUCAGAUGAUAGCAACAAAGAGcauuaucc
..........(((((((((((.(((((((((((........(((((((....)))))))...))))))))))).)))).....))))))).......

Structure
ucccaaacaa       -----    u           UCAAACAA       u 
          guucuuu     uauu uuuGAAUCGUU        GUCauuu a
          |||||||     |||| |||||||||||        |||||||  
          cGAGAAA     AUAG AGACUUAGuag        uaguagg a
---ccuauua       CAACG    U           -----uag       a 


Annotation confidence Low
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Genome context
chr4: 42411377-42411473 [-]

Database links

Mature mtr-miR5292b-5p

Accession MIMAT0055221
Description Medicago truncatula mtr-miR5292b-5p mature miRNA
Sequence 26 - GAAUCGUUUCAAACAAGUC - 44
Evidence experimental
unknown

Mature mtr-miR5292b-3p

Accession MIMAT0021358
Description Medicago truncatula mtr-miR5292b-3p mature miRNA
Sequence 66 - GAUUCAGAUGAUAGCAACAAAGAG - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010