miRBase entry: mtr-MIR5291c

Stem-loop mtr-MIR5291c


Accession
MI0018459
Description
Medicago truncatula mtr-MIR5291c precursor miRNA


Sequence

6127 reads, 55.0 reads per million, 111 experiments
gaugaAUCAAAUCCAAUCCAUUAACAAAUuauuuuGUUUGAUGGAUGGAUUGGAUGGAUuuuauagug
...(((((..((((((((((((..(((((......)))))...)))))))))))).))))).......

Structure
----gau     AA            -AA     ua 
       gaAUC  AUCCAAUCCAUU   CAAAU  u
       |||||  ||||||||||||   |||||   
       uuUAG  UAGGUUAGGUAG   GUUUG  u
gugauau     -G            GUA     uu 


Annotation confidence Low
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Genome context
chr5: 9564346-9564413 [-]

Database links

Mature mtr-miR5291c-5p

Accession MIMAT0055219
Description Medicago truncatula mtr-miR5291c-5p mature miRNA
Sequence 6 - AUCAAAUCCAAUCCAUUAACAAAU - 29
Evidence experimental
unknown

Mature mtr-miR5291c-3p

Accession MIMAT0021356
Description Medicago truncatula mtr-miR5291c-3p mature miRNA
Sequence 36 - GUUUGAUGGAUGGAUUGGAUGGAU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010