miRBase entry: mtr-MIR5291a

Stem-loop mtr-MIR5291a


Accession
MI0018457
Description
Medicago truncatula mtr-MIR5291a precursor miRNA


Sequence

8927 reads, 78.0 reads per million, 111 experiments
gauggAUCAAAUCCAAUCCAUUAACAAAUuuuuuuguuugAUGGAUGGAUUGGAUGGAUUUUGUAuug
...(((((..((((((((((((..(((((......)))))...)))))))))))).))))).......

Structure
----gau     AA            -AA     uu 
       ggAUC  AUCCAAUCCAUU   CAAAU  u
       |||||  ||||||||||||   |||||   
       UUUAG  UAGGUUAGGUAG   guuug  u
guuAUGU     -G            GUA     uu 


Annotation confidence Low
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Genome context
chr2: 5303197-5303264 [-]

Database links

Mature mtr-miR5291a-5p

Accession MIMAT0055217
Description Medicago truncatula mtr-miR5291a-5p mature miRNA
Sequence 6 - AUCAAAUCCAAUCCAUUAACAAAU - 29
Evidence experimental
unknown

Mature mtr-miR5291a-3p

Accession MIMAT0021354
Description Medicago truncatula mtr-miR5291a-3p mature miRNA
Sequence 41 - AUGGAUGGAUUGGAUGGAUUUUGUA - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010