miRBase entry: mtr-MIR5286b

Stem-loop mtr-MIR5286b


Accession
MI0018455
Description
Medicago truncatula mtr-MIR5286b precursor miRNA


Sequence

26396 reads, 218.0 reads per million, 111 experiments
augaaggacaugacagaauaacuccaguUGUCCAGUGUUUGAUUUGUAAAAcaguuucaggaagaggACAAACUGGAGGCAAGGGACAGGAcaaaaacua
.....(..(.((.(.......((((((((((((..(.(((((.((((...))))..))))).)..)))).))))))))......).)))..)........

Structure
---augaa ga a  a agaauaa        -    AG G     -U    A 
        g  c ug c       cuccaguU GUCC  U UUUGA  UUGU  
        |  | || |       |||||||| ||||  | |||||  |||| A
        c  G AC G       GAGGUCAA CAgg  a ggacu  gacA  
aucaaaaa AG -  A -GGAACG        A    ag a     uu    A 


Annotation confidence Low
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Genome context
AC140545.26: 64363-64462 [+]

Database links

Mature mtr-miR5286b-5p

Accession MIMAT0055215
Description Medicago truncatula mtr-miR5286b-5p mature miRNA
Sequence 29 - UGUCCAGUGUUUGAUUUGUAAAA - 51
Evidence experimental
unknown

Mature mtr-miR5286b-3p

Accession MIMAT0021352
Description Medicago truncatula mtr-miR5286b-3p mature miRNA
Sequence 68 - ACAAACUGGAGGCAAGGGACAGGA - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010