miRBase entry: mtr-MIR5289b

Stem-loop mtr-MIR5289b


Accession
MI0018454
Description
Medicago truncatula mtr-MIR5289b precursor miRNA


Sequence

12939 reads, 142.0 reads per million, 111 experiments
uuaacuccCGAGGAAAACUGAAAACUUCGGCAguuaaCUGCCGAAGUUUUCAGUUUacugucgaaguuuu
..((((..(((((.(((((((((((((((((((....))))))))))))))))))).)).))).))))..

Structure
uu    cc   -  A                   u 
  aacu  CGA GG AAACUGAAAACUUCGGCAg u
  ||||  ||| || |||||||||||||||||||  
  uuga  gcu uc UUUGACUUUUGAAGCCGUC a
uu    -a   g  a                   a 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
chr7: 30397575-30397644 [-]

Database links

Mature mtr-miR5289b-5p

Accession MIMAT0021351
Description Medicago truncatula mtr-miR5289b-5p mature miRNA
Sequence 9 - CGAGGAAAACUGAAAACUUCGGCA - 32
Evidence experimental
Illumina [1]

Mature mtr-miR5289b-3p

Accession MIMAT0055214
Description Medicago truncatula mtr-miR5289b-3p mature miRNA
Sequence 38 - CUGCCGAAGUUUUCAGUUU - 56
Evidence experimental
unknown

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010