Stem-loop mtr-MIR5286a

Accession

MI0018449

Description

Medicago truncatula mtr-MIR5286a precursor miRNA

Sequence

37202 reads, 296.0 reads per million, 111 experiments

aacaauuuuaguUGUCCAGUGUUUGAUUUGUAAAAcuguuucaaguaCAGGACAAACUGGAGGCAAGGGACaggacaa
.....((((((((((((.((((((((..............)))))))).)))).))))))))................

Structure

-----------aacaa        -    A        UUUGUA 
                uuuuaguU GUCC GUGUUUGA      A
                |||||||| |||| ||||||||       
                GAGGUCAA CAGG Caugaacu      A
aacaggaCAGGGAACG        A    A        uugucA 

Annotation confidence Low

Genome context

chr2: 14875112-14875189 [-]

Mature mtr-miR5286a-5p

• Accession: MIMAT0055210
• Description: Medicago truncatula mtr-miR5286a-5p mature miRNA
• Sequence: 13 - UGUCCAGUGUUUGAUUUGUAAAA - 35
• Evidence: experimental ; unknown

Mature mtr-miR5286a-3p

• Accession: MIMAT0021346
• Description: Medicago truncatula mtr-miR5286a-3p mature miRNA
• Sequence: 48 - CAGGACAAACUGGAGGCAAGGGAC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010