Accession
MI0018448
Description
Medicago truncatula
mtr-MIR5285c precursor miRNA
Sequence
17879
reads,
136.0
reads per million, 111 experiments
aaacacuauuaggauuggagucucuugguuacgggaagggauUGGGACUUUGGGUAGAAUUAGGCGgaagaCUUAUUCUUGUAACCCAUUGAUuucucuuuguaacgaaacuca
.................((((...((.((((((((.(((((((((.....((((((((((.((........)).)))))....)))))))))))))).)))))))).)))))).
.................((((...((.((((((((.(((((((((.....((((((((((.((........)).)))))....)))))))))))))).)))))))).)))))).
Structure
aaacacuauuaggauug cuc g a GACUU ---- U GCG
gagu uu guuacggg agggauUGG UGGGU AGAAU AG g
|||| || |||||||| ||||||||| ||||| ||||| ||
cuca aa caauguuu ucuuUAGUU ACCCA UCUUA UC a
----------------a --- g c ----- AUGU U aga
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr3: 39172452-39172565 [+]
Database links
Mature mtr-miR5285c-5p
| Accession | MIMAT0021345 |
| Description | Medicago truncatula mtr-miR5285c-5p mature miRNA |
| Sequence | 43 - UGGGACUUUGGGUAGAAUUAGGCG - 66 |
| Evidence |
experimental
Illumina [1] |
Mature mtr-miR5285c-3p
| Accession | MIMAT0055209 |
| Description | Medicago truncatula mtr-miR5285c-3p mature miRNA |
| Sequence | 72 - CUUAUUCUUGUAACCCAUUGAU - 93 |
| Evidence |
experimental
unknown |
References
|
