miRBase entry: mtr-MIR2600e

Dead hairpin entry

Stem-loop mtr-MIR2600e


Accession
MI0018434
Description
Medicago truncatula mtr-MIR2600e precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

15136 reads, 167.0 reads per million, 111 experiments
gugacauuggccaaucacaaugccacaauguuuguguuucUAGAGUUGGGUGACAUUGGccaaucacaaugccacaauguuuguguuucucucucuuucacAAGCAUUGUGGCAUUGUGAUUGGCcaaugucac
((((((((((((((((((((((((((((((((((((.....((((..(((.(((((((((..........))))........))))).))).))))..))))))))))))))))))))))))))))))))))))

Structure
                                    uuucU    UU   U     --------    caau 
gugacauuggccaaucacaaugccacaauguuugug     AGAG  GGG GACAU        UGGc    c
||||||||||||||||||||||||||||||||||||     ||||  ||| |||||        ||||     
cacuguaacCGGUUAGUGUUACGGUGUUACGAAcac     ucuc  cuc uugug        accg    a
                                    ---uu    -u   u     uuuguaac    uaac