Stem-loop mtr-MIR2600c

Accession

MI0018432

Description

Medicago truncatula mtr-MIR2600c precursor miRNA

Sequence

12201 reads, 164.0 reads per million, 111 experiments

gugacauugaccaaucacaaugucacaaugcuuGUGAAAGAGAGAGAAACACAAGCAUUGUGGCAUUGUGAUUGGUcaaugucac
((((((((((((((((((((((((((((((((((((.............))))))))))))))))))))))))))))))))))))

Structure

                                    AAAGA 
gugacauugaccaaucacaaugucacaaugcuuGUG     G
||||||||||||||||||||||||||||||||||||     A
cacuguaacUGGUUAGUGUUACGGUGUUACGAACAC     G
                                    AAAGA 

Annotation confidence Low

Genome context

chr1: 31878213-31878297 [+]

Mature mtr-miR2600c-5p

• Accession: MIMAT0055193
• Description: Medicago truncatula mtr-miR2600c-5p mature miRNA
• Sequence: 34 - GUGAAAGAGAGAGAAACACAA - 54
• Evidence: experimental ; unknown

Mature mtr-miR2600c-3p

• Accession: MIMAT0021329
• Description: Medicago truncatula mtr-miR2600c-3p mature miRNA
• Sequence: 53 - AAGCAUUGUGGCAUUGUGAUUGGU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010