Stem-loop mtr-MIR2600b

Accession

MI0018431

Description

Medicago truncatula mtr-MIR2600b precursor miRNA

Sequence

7283 reads, 88.0 reads per million, 111 experiments

gugacauuggccaaucacaaugucccaaUGCUUGUGAAAGAGAGAGAAACAuAAGCAUUGUGGCAUUGUGAUUGGUcaaugucac
((((((((((((((((((((((((.(((((((((((.............))))))))))).))))))))))))))))))))))))

Structure

                        c           AAAGA 
gugacauuggccaaucacaauguc caaUGCUUGUG     G
|||||||||||||||||||||||| |||||||||||     A
cacuguaacUGGUUAGUGUUACGG GUUACGAAuAC     G
                        U           AAAGA 

Annotation confidence Low

Genome context

CU571152.5: 117865-117949 [+]

Mature mtr-miR2600b-5p

• Accession: MIMAT0055192
• Description: Medicago truncatula mtr-miR2600b-5p mature miRNA
• Sequence: 29 - UGCUUGUGAAAGAGAGAGAAACA - 51
• Evidence: experimental ; unknown

Mature mtr-miR2600b-3p

• Accession: MIMAT0021328
• Description: Medicago truncatula mtr-miR2600b-3p mature miRNA
• Sequence: 53 - AAGCAUUGUGGCAUUGUGAUUGGU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010