Accession
MI0018427
Description
Medicago truncatula
mtr-MIR5281e precursor miRNA
Sequence
49134
reads,
335.0
reads per million, 111 experiments
ccaagcaauauacucccgcCGGUCCUAUUUAUAAGAGAAuuuuuugucaacaaaaguugauguaucuaguuaaaaauucaguccaaauacuguugaccuaaacuucUCUUAUAAAUAGGACCGGAGGGAGuacuucacauaac
..........(((((((.(((((((((((((((((((((.(((..(((((((....(((........................)))....)))))))..))).))))))))))))))))))))).)))))))...........
..........(((((((.(((((((((((((((((((((.(((..(((((((....(((........................)))....)))))))..))).))))))))))))))))))))).)))))))...........
Structure
-ccaagcaaua g u uu aaag auguaucuagu
uacuccc cCGGUCCUAUUUAUAAGAGAA uuu gucaaca uug u
||||||| ||||||||||||||||||||| ||| ||||||| |||
auGAGGG GGCCAGGAUAAAUAUUCUcuu aaa caguugu aac a
caauacacuuc A c uc caua cugacuuaaaa
Annotation confidence
Low
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Genome context
chr6: 21484129-21484271 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR5281e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR5281e-5p
| Accession | MIMAT0055188 |
| Description | Medicago truncatula mtr-miR5281e-5p mature miRNA |
| Sequence | 20 - CGGUCCUAUUUAUAAGAGAA - 39 |
| Evidence |
experimental
unknown |
Mature mtr-miR5281e-3p
| Accession | MIMAT0021324 |
| Description | Medicago truncatula mtr-miR5281e-3p mature miRNA |
| Sequence | 107 - UCUUAUAAAUAGGACCGGAGGGAG - 130 |
| Evidence |
experimental
Illumina [1] |
References
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