Accession
MI0018426
Description
Medicago truncatula
mtr-MIR5281d precursor miRNA
Sequence
87031
reads,
596.0
reads per million, 111 experiments
uuacuuguuacuuuuaaauuacuaccUCCGGUCCUAUUUAUAAGAGAAauuuaggucaacaaaagugaauguauuugaacugaauuuuuaacuagauacaucaacuuuaguugacccaaaauucUCUUAUAAAUAGGACCGGAGGGAGuacaaugcaaagauggguuucucac
..(((((((..........((((.((((((((((((((((((((((((.(((.(((((((.(((((..(((((((((...............)))))))))..))))).))))))).))).)))))))))))))))))))))))).)))).........))))))).......
..(((((((..........((((.((((((((((((((((((((((((.(((.(((((((.(((((..(((((((((...............)))))))))..))))).))))))).))).)))))))))))))))))))))))).)))).........))))))).......
Structure
-----uu acuuuuaaau a a a a ga aacuga
acuuguu uacu ccUCCGGUCCUAUUUAUAAGAGAA uuu ggucaac aaagu auguauuug a
||||||| |||| |||||||||||||||||||||||| ||| ||||||| ||||| ||||||||| u
uggguag auGA GGAGGCCAGGAUAAAUAUUCUcuu aaa ccaguug uuuca uacauagau u
cacucuu -aaacguaac G a c a ac caauuu
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr2: 13445238-13445410 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from mtr-MIR5281d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR5281d-5p
| Accession | MIMAT0055187 |
| Description | Medicago truncatula mtr-miR5281d-5p mature miRNA |
| Sequence | 27 - UCCGGUCCUAUUUAUAAGAGAA - 48 |
| Evidence |
experimental
unknown |
Mature mtr-miR5281d-3p
| Accession | MIMAT0021323 |
| Description | Medicago truncatula mtr-miR5281d-3p mature miRNA |
| Sequence | 125 - UCUUAUAAAUAGGACCGGAGGGAG - 148 |
| Evidence |
experimental
Illumina [1] |
References
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