Accession
MI0018423
Description
Medicago truncatula
mtr-MIR5281a precursor miRNA
Sequence
14907
reads,
136.0
reads per million, 111 experiments
uugugacauacucccuuCGGUCCUAUUUACAAGAGAAAuuugacuuuuuagauacauuaaauaauguauguaucuaaucaagaaucuaaaccaaauacauaaauuauuuaauguaucuaaaaAGUAAAUUGUCUCUUGUAAAUAGGAucggagggaguguauauacuc
..(((..(((((((((((((((((((((((((((((((((((.((((((((((((((((((((((.(((((((.....................))))))).)))))))))))))))))))))))))))).)))))))))))))))))))))))))))))...)))..
..(((..(((((((((((((((((((((((((((((((((((.((((((((((((((((((((((.(((((((.....................))))))).)))))))))))))))))))))))))))).)))))))))))))))))))))))))))))...)))..
Structure
uu -ac - a g cuaaucaag gug auacucccuuCGGUCCUAUUUACAAGAGA AAuuug cuuuuuagauacauuaaauaau uauguau a ||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| a cau ugugagggaggcuAGGAUAAAUGUUCUCU UUAAAU GAaaaaucuauguaauuuauua auacaua u cu aua G - a aaccaaauc
Annotation confidence
Low
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Genome context
chr8: 20624516-20624683 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR5281a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR5281a-5p
| Accession | MIMAT0055184 |
| Description | Medicago truncatula mtr-miR5281a-5p mature miRNA |
| Sequence | 18 - CGGUCCUAUUUACAAGAGAAA - 38 |
| Evidence |
experimental
unknown |
Mature mtr-miR5281a-3p
| Accession | MIMAT0021320 |
| Description | Medicago truncatula mtr-miR5281a-3p mature miRNA |
| Sequence | 123 - AGUAAAUUGUCUCUUGUAAAUAGGA - 147 |
| Evidence |
experimental
Illumina [1] |
References
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