Stem-loop mtr-MIR2590g

Accession

MI0018412

Description

Medicago truncatula mtr-MIR2590g precursor miRNA

Literature search

1 open access papers mention mtr-MIR2590g
(1 sentences)

Sequence

19082 reads, 171.0 reads per million, 111 experiments

cuagccggaaacCAUGGGGUGGUGGGUGUUAUGUAUuuuuuuuuuuaugaaaaauuaauAAAUGAGACUGAAAUCUAAAGGUGauuauugugu
..........(((...((((..(.(((.((((.((((..((((((...))))))..)))).)))).))).).))))...)))...........

Structure

-cuagccggaa   AUG    GG G   G    G    uu      u 
           acC   GGGU  U GGU UUAU UAUu  uuuuuu  
           |||   ||||  | ||| |||| ||||  |||||| a
           UGG   UCUA  A UCA AGUA Auaa  aaaaag  
uguguuauuaG   AAA    -A G   G    A    uu      u 

Annotation confidence Medium

Genome context

chr3: 36693381-36693473 [+]

Mature mtr-miR2590g-5p

• Accession: MIMAT0055173
• Description: Medicago truncatula mtr-miR2590g-5p mature miRNA
• Sequence: 13 - CAUGGGGUGGUGGGUGUUAUGUAU - 36
• Evidence: experimental ; unknown

Mature mtr-miR2590g-3p

• Accession: MIMAT0021309
• Description: Medicago truncatula mtr-miR2590g-3p mature miRNA
• Sequence: 60 - AAAUGAGACUGAAAUCUAAAGGUG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010