Stem-loop mtr-MIR5272e

Accession

MI0018409

Description

Medicago truncatula mtr-MIR5272e precursor miRNA

Sequence

22712 reads, 195.0 reads per million, 111 experiments

uuugagguGAAUUGAUUUAUGUUUGGAUACACuuucuuacAAGUGAUUCUUAUGAAUUGAUGUUguuugaauag
((((((....(((((((((((...((((.(((((......))))))))).)))))))))))....))))))...

Structure

---      guGA           UUU    A     uc 
   uuugag    AUUGAUUUAUG   GGAU CACuu  u
   ||||||    |||||||||||   |||| |||||   
   aaguuu    UAGUUAAGUAU   CUUA GUGAA  u
gau      gUUG           --U    -     ca 

Annotation confidence Low

Genome context

chr7: 30578101-30578174 [+]

Mature mtr-miR5272e-5p

• Accession: MIMAT0021306
• Description: Medicago truncatula mtr-miR5272e-5p mature miRNA
• Sequence: 9 - GAAUUGAUUUAUGUUUGGAUACAC - 32
• Evidence: experimental ; Illumina [1]

Mature mtr-miR5272e-3p

• Accession: MIMAT0055170
• Description: Medicago truncatula mtr-miR5272e-3p mature miRNA
• Sequence: 41 - AAGUGAUUCUUAUGAAUUGAUGUU - 64
• Evidence: experimental ; unknown

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010