Stem-loop mtr-MIR5269b

Accession

MI0018397

Description

Medicago truncatula mtr-MIR5269b precursor miRNA

Sequence

4965 reads, 58.0 reads per million, 111 experiments

uuAUUGGGUGAAAUCAAUGUAGaaccuacgcuuugaaaaugaaacuuacauAAAGUGGUGGGACAUACAUUGAUUucacccaaaag
...((((((((((((((((((...(((((((((((...............)))))).)))))...))))))))))))))))))...

Structure

uuA                  Gaa     -      aaaaug 
   UUGGGUGAAAUCAAUGUA   ccuac gcuuug      a
   ||||||||||||||||||   ||||| ||||||      a
   aacccacuUUAGUUACAU   GGGUG UGAAAu      a
gaa                  ACA     G      acauuc 

Annotation confidence Low

Genome context

chr4: 32440630-32440715 [+]

Mature mtr-miR5269b-5p

• Accession: MIMAT0055158
• Description: Medicago truncatula mtr-miR5269b-5p mature miRNA
• Sequence: 3 - AUUGGGUGAAAUCAAUGUAG - 22
• Evidence: experimental ; unknown

Mature mtr-miR5269b-3p

• Accession: MIMAT0021294
• Description: Medicago truncatula mtr-miR5269b-3p mature miRNA
• Sequence: 52 - AAAGUGGUGGGACAUACAUUGAUU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010