miRBase entry: mtr-MIR5269a

Stem-loop mtr-MIR5269a


Accession
MI0018396
Description
Medicago truncatula mtr-MIR5269a precursor miRNA


Sequence

2014 reads, 24.0 reads per million, 111 experiments
uUAGUUUAAAUCAUUGUGGaacuacacuuuggaaauauaacucauacAAAGUGGUGGAACAUACAUUGAUUucaucuaa
.(((...((((((.((((...((((((((((...............)))))).))))....)))).))))))...))).

Structure
u   UUU      U    -Gaa    -      gaaaua 
 UAG   AAAUCA UGUG    cuac acuuug      u
 |||   |||||| ||||    |||| ||||||      a
 auc   uUUAGU ACAU    GGUG UGAAAc      a
a   uac      U    ACAA    G      auacuc 


Annotation confidence Low
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Genome context
chr1: 1709186-1709264 [+]

Database links

Mature mtr-miR5269a-5p

Accession MIMAT0055157
Description Medicago truncatula mtr-miR5269a-5p mature miRNA
Sequence 2 - UAGUUUAAAUCAUUGUGG - 19
Evidence experimental
unknown

Mature mtr-miR5269a-3p

Accession MIMAT0021293
Description Medicago truncatula mtr-miR5269a-3p mature miRNA
Sequence 48 - AAAGUGGUGGAACAUACAUUGAUU - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010