miRBase entry: mtr-MIR5267m

Stem-loop mtr-MIR5267m


Accession
MI0018391
Description
Medicago truncatula mtr-MIR5267m precursor miRNA


Sequence

10642 reads, 103.0 reads per million, 111 experiments
caaauucuauAGGCAUUUGCUAGAAUACACCCACuuauuuuuuAGAAGGAGUAUUUUAGCAAGUuaauaacuaaaaaguggu
..............((((((((((((((.((..((........))..)).))))))))))))))..................

Structure
----caaauucuauAGGC              A  CA  uau 
                  AUUUGCUAGAAUAC CC  Cu   u
                  |||||||||||||| ||  ||    
                  UGAACGAUUUUAUG GG  GA   u
uggugaaaaaucaauaau              A  AA  uuu 


Annotation confidence Low
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Genome context
chr7: 35185846-35185927 [-]

Database links

Mature mtr-miR5267m-5p

Accession MIMAT0021288
Description Medicago truncatula mtr-miR5267m-5p mature miRNA
Sequence 11 - AGGCAUUUGCUAGAAUACACCCAC - 34
Evidence experimental
Illumina [1]

Mature mtr-miR5267m-3p

Accession MIMAT0055152
Description Medicago truncatula mtr-miR5267m-3p mature miRNA
Sequence 44 - AGAAGGAGUAUUUUAGCAAGU - 64
Evidence experimental
unknown

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010