miRBase entry: mtr-MIR5267l

Stem-loop mtr-MIR5267l


Accession
MI0018390
Description
Medicago truncatula mtr-MIR5267l precursor miRNA


Sequence

6302 reads, 69.0 reads per million, 111 experiments
agcaaauccuauAGGCAUUUGCUAGGAUACACCCACuuagauuuuagAAGGAGUAUUUUAGCAAGUGAAUAacuaaaaagugg
...........((..(((((((((((((((.((..((........))..)).)))))))))))))))..))............

Structure
-agcaaauccua  GG               A  CA  uag 
            uA  CAUUUGCUAGGAUAC CC  Cu   a
            ||  ||||||||||||||| ||  ||    
            AU  GUGAACGAUUUUAUG GG  ga   u
ggugaaaaauca  AA               A  AA  uuu 


Annotation confidence Low
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Genome context
chr4: 6513421-6513503 [-]

Database links

Mature mtr-miR5267l-5p

Accession MIMAT0021287
Description Medicago truncatula mtr-miR5267l-5p mature miRNA
Sequence 13 - AGGCAUUUGCUAGGAUACACCCAC - 36
Evidence experimental
Illumina [1]

Mature mtr-miR5267l-3p

Accession MIMAT0055151
Description Medicago truncatula mtr-miR5267l-3p mature miRNA
Sequence 48 - AAGGAGUAUUUUAGCAAGUGAAUA - 71
Evidence experimental
unknown

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010