Stem-loop mtr-MIR5267k

Accession

MI0018389

Description

Medicago truncatula mtr-MIR5267k precursor miRNA

Sequence

10157 reads, 101.0 reads per million, 111 experiments

agcaaauccuauAGGCAUUUGCUAGAAUACACCCACuuauuuuuuagaaugaguauuuuagcaaaugaAUAACUAAAAAGUGGUUAA
...............(((((((((((((......((((((((....)))))))))))))))))))))..((((((.....)))))).

Structure

-----agcaaauccuauAGG             ACACCC        u 
                    CAUUUGCUAGAAU      ACuuauuu u
                    |||||||||||||      ||||||||  
                    guaaacgauuuua      ugaguaag u
AAUUGGUGAAAAAUCAAUAa             ------        a 

Annotation confidence Low

Genome context

chr4: 693121-693207 [+]

Mature mtr-miR5267k-5p

• Accession: MIMAT0021286
• Description: Medicago truncatula mtr-miR5267k-5p mature miRNA
• Sequence: 13 - AGGCAUUUGCUAGAAUACACCCAC - 36
• Evidence: experimental ; Illumina [1]

Mature mtr-miR5267k-3p

• Accession: MIMAT0055150
• Description: Medicago truncatula mtr-miR5267k-3p mature miRNA
• Sequence: 69 - AUAACUAAAAAGUGGUUAA - 87
• Evidence: experimental ; unknown

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010