Stem-loop mtr-MIR5267j

Accession

MI0018388

Description

Medicago truncatula mtr-MIR5267j precursor miRNA

Sequence

9644 reads, 94.0 reads per million, 111 experiments

caaaucuuauAGGCAUUUGCUAGAAUACACCCACuuauuuuuuagaauGAGUAUUUUAGCAAGUGAAUAACUaaaaaaugguuca
.........((..(((((((((((((......((((((((....)))))))))))))))))))))..))((((.....))))...

Structure

-------caaaucuua  GG             ACACCC        u 
                uA  CAUUUGCUAGAAU      ACuuauuu u
                ||  |||||||||||||      ||||||||  
                AU  GUGAACGAUUUUA      UGAGuaag u
acuugguaaaaaaUCA  AA             ------        a 

Annotation confidence Low

Genome context

chr2: 33205800-33205884 [-]

Mature mtr-miR5267j-5p

• Accession: MIMAT0021285
• Description: Medicago truncatula mtr-miR5267j-5p mature miRNA
• Sequence: 11 - AGGCAUUUGCUAGAAUACACCCAC - 34
• Evidence: experimental ; Illumina [1]

Mature mtr-miR5267j-3p

• Accession: MIMAT0055149
• Description: Medicago truncatula mtr-miR5267j-3p mature miRNA
• Sequence: 49 - GAGUAUUUUAGCAAGUGAAUAACU - 72
• Evidence: experimental ; unknown

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010