Stem-loop mtr-MIR5267h

Accession

MI0018386

Description

Medicago truncatula mtr-MIR5267h precursor miRNA

Sequence

9103 reads, 87.0 reads per million, 111 experiments

caaauccuauAGGCAUUUGCUAGAAUACACCCACuuauuguuuagaaugaguauuuuAGCAAGUGAAUAACUAAAAAGUGGuuaa
.............(((((((((((((......(((((((......))))))))))))))))))))..((((((.....)))))).

Structure

-------caaauccuauAGG             ACACCC       gu 
                    CAUUUGCUAGAAU      ACuuauu  u
                    |||||||||||||      |||||||   
                    GUGAACGAuuuua      ugaguaa  u
aauuGGUGAAAAAUCAAUAA             ------       ga 

Annotation confidence Low

Genome context

chr2: 17403929-17404013 [+]

Mature mtr-miR5267h-5p

• Accession: MIMAT0021283
• Description: Medicago truncatula mtr-miR5267h-5p mature miRNA
• Sequence: 11 - AGGCAUUUGCUAGAAUACACCCAC - 34
• Evidence: experimental ; Illumina [1]

Mature mtr-miR5267h-3p

• Accession: MIMAT0055147
• Description: Medicago truncatula mtr-miR5267h-3p mature miRNA
• Sequence: 58 - AGCAAGUGAAUAACUAAAAAGUGG - 81
• Evidence: experimental ; unknown

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010