miRBase entry: mtr-MIR5267g

Stem-loop mtr-MIR5267g


Accession
MI0018385
Description
Medicago truncatula mtr-MIR5267g precursor miRNA


Sequence

10728 reads, 99.0 reads per million, 111 experiments
gcaaaucuuauAGGCAUUUGCUAGAAUACACCCACuuauuuuucagAAGGAGUAUUUUAGCAAGUGAAUAacuaaaaagug
..........((..(((((((((((((((.((..((........))..)).)))))))))))))))..))...........

Structure
-gcaaaucuua  GG               A  CA  uau 
           uA  CAUUUGCUAGAAUAC CC  Cu   u
           ||  ||||||||||||||| ||  ||    
           AU  GUGAACGAUUUUAUG GG  ga   u
gugaaaaauca  AA               A  AA  cuu 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
chr1: 34063642-34063722 [+]

Database links

Mature mtr-miR5267g-5p

Accession MIMAT0021282
Description Medicago truncatula mtr-miR5267g-5p mature miRNA
Sequence 12 - AGGCAUUUGCUAGAAUACACCCAC - 35
Evidence experimental
Illumina [1]

Mature mtr-miR5267g-3p

Accession MIMAT0055146
Description Medicago truncatula mtr-miR5267g-3p mature miRNA
Sequence 47 - AAGGAGUAUUUUAGCAAGUGAAUA - 70
Evidence experimental
unknown

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010