miRBase entry: mtr-MIR5267a

Stem-loop mtr-MIR5267a


Accession
MI0018379
Description
Medicago truncatula mtr-MIR5267a precursor miRNA


Sequence

11434 reads, 114.0 reads per million, 111 experiments
caaauccuauAGGCAUUUGCUAGAAUACACCCACuuauuuuuuAGAAGGAGUAUUUUAGCAAAUGAAuaacuaaaaagugg
.........((..(((((((((((((((.((..((........))..)).)))))))))))))))..))............

Structure
---caaauccua  GG               A  CA  uau 
            uA  CAUUUGCUAGAAUAC CC  Cu   u
            ||  ||||||||||||||| ||  ||    
            au  GUAAACGAUUUUAUG GG  GA   u
ggugaaaaauca  AA               A  AA  uuu 


Annotation confidence Low
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Genome context
chr3: 1028186-1028266 [+]

Database links

Mature mtr-miR5267a-5p

Accession MIMAT0021276
Description Medicago truncatula mtr-miR5267a-5p mature miRNA
Sequence 11 - AGGCAUUUGCUAGAAUACACCCAC - 34
Evidence experimental
Illumina [1]

Mature mtr-miR5267a-3p

Accession MIMAT0055140
Description Medicago truncatula mtr-miR5267a-3p mature miRNA
Sequence 44 - AGAAGGAGUAUUUUAGCAAAUGAA - 67
Evidence experimental
unknown

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010