Stem-loop mtr-MIR5261

Accession

MI0018365

Description

Medicago truncatula mtr-MIR5261 precursor miRNA

Sequence

14892 reads, 77.0 reads per million, 111 experiments

caaugaaacuaguacaaucaaaucuacgAUGAAUUUCAUUGUAGAUGGCUUUGGCUacaguuguuu
.(((((...((((.(((....(((((((((((...)))))))))))....)))))))...))))).

Structure

c     aac    a   ucaa           A 
 aauga   uagu caa    aucuacgAUGA  
 |||||   |||| |||    ||||||||||| U
 uuguu   aUCG GUU    UAGAUGUUACU  
u     gac    -   UCGG           U 

Annotation confidence High

Genome context

chr8: 2262771-2262836 [+]

Mature mtr-miR5261-5p

• Accession: MIMAT0055129
• Description: Medicago truncatula mtr-miR5261-5p mature miRNA
• Sequence: 29 - AUGAAUUUCAUUGUAGAUGGC - 49
• Evidence: experimental ; unknown

Mature mtr-miR5261-3p

• Accession: MIMAT0021261
• Description: Medicago truncatula mtr-miR5261-3p mature miRNA
• Sequence: 36 - UCAUUGUAGAUGGCUUUGGCU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010