miRBase entry: mtr-MIR5259

Stem-loop mtr-MIR5259


Accession
MI0018363
Description
Medicago truncatula mtr-MIR5259 precursor miRNA


Sequence

6553 reads, 60.0 reads per million, 110 experiments
guuaagaacuuaUCUUCCGAAACUCUCCCUUGUAauuugagaguuguuuauauucucaaauuaCAAGGGGUAUUGCGGAGGAUAacuucugaug
....((((.((((((((((.....(.((((((((((((((((((.......))))))))))))))))))).....)))))))))).))))....

Structure
guua    c          AAACU U                  ug 
    agaa uuaUCUUCCG     C CCCUUGUAauuugagagu  u
    |||| ||||||||||     | ||||||||||||||||||  u
    ucuu aAUAGGAGGC     G GGGAACauuaaacucuua  u
guag    c          GUUAU -                  ua 


Annotation confidence High
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Genome context
chr7: 6865196-6865289 [-]

Database links

Mature mtr-miR5259-5p

Accession MIMAT0055128
Description Medicago truncatula mtr-miR5259-5p mature miRNA
Sequence 13 - UCUUCCGAAACUCUCCCUUGUA - 34
Evidence experimental
unknown

Mature mtr-miR5259-3p

Accession MIMAT0021259
Description Medicago truncatula mtr-miR5259-3p mature miRNA
Sequence 64 - CAAGGGGUAUUGCGGAGGAUA - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010