Accession
MI0018352
Description
Medicago truncatula
mtr-MIR5251 precursor miRNA
Sequence
19221
reads,
151.0
reads per million, 111 experiments
ucucggagaauuacAGUAGAUCUAGUUGGUGUCUUcuugaacuugaaaaaaucauggaaaaccgugguacucauggucaaauaguuauaccaauauuuUACCAUAUUGAUCCAGCCAUUguucgucguca
....(((..(.((..(((((....((((((((((..((((.(.(((....(((((((....)))))))..))).).))))..))..))))))))..)))))..)).)..)))..................
....(((..(.((..(((((....((((((((((..((((.(.(((....(((((((....)))))))..))).).))))..))..))))))))..)))))..)).)..)))..................
Structure
--------------ucuc ga u cA UCUA -- Uc a u aaaa a
gga a ua GUAGA GUUGGUGU CU uuga c uga aucaugg a
||| | || ||||| |||||||| || |||| | ||| |||||||
CCU U AU CAUuu uaaccaua ga aacu g acu uggugcc a
acugcugcuugUUACCGA AG U AC --ua uu ua g u --ca a
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr5: 29453224-29453353 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR5251
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR5251-5p
| Accession | MIMAT0021247 |
| Description | Medicago truncatula mtr-miR5251-5p mature miRNA |
| Sequence | 15 - AGUAGAUCUAGUUGGUGUCUU - 35 |
| Evidence |
experimental
Illumina [1] |
Mature mtr-miR5251-3p
| Accession | MIMAT0055121 |
| Description | Medicago truncatula mtr-miR5251-3p mature miRNA |
| Sequence | 99 - UACCAUAUUGAUCCAGCCAUU - 119 |
| Evidence |
experimental
unknown |
References
|
