Accession
MI0018350
Description
Medicago truncatula
mtr-MIR5249 precursor miRNA
Sequence
29220
reads,
238.0
reads per million, 111 experiments
caugugcaaaACUUAGGGGGCAGUUUUGUAGucuuuuuucuuugagggccaaaaucgcaacuuuggaaaaguuagggggcuaaaacugcuaucaagccuuauuuuuaaacaauucucaucgauucggcuuucaucuauuuauuuuaggcuuaauugcacuuuuugcccacUAUCUUUCCAAAAGUUGCGauuuuggcccucuaccuaauuaaaauacaaaacagccuccuauguauugguguaac
......(((.((.((((((((.((((((((.............((((((((((((((((((((((((((.(.(((.((((.((((.(((.((.((((((..............................................)))))).)).))).)))).)))).))).)))))).))))))))))))))))))))).............)))))))).)))))))).)).))).......
......(((.((.((((((((.((((((((.............((((((((((((((((((((((((((.(.(((.((((.((((.(((.((.((((((..............................................)))))).)).))).)))).)))).))).)))))).))))))))))))))))))))).............)))))))).)))))))).)).))).......
Structure
-caugug a U A Gucuuuuuucuuu - a u g u c u c uauuuuuaaacaauucucaucg
caa AC UAGGGGGC GUUUUGUA gagggccaaaaucgcaacuuu ggaaa g uag gggc aaaa ugc au aagccu a
||| || |||||||| |||||||| ||||||||||||||||||||| ||||| | ||| |||| |||| ||| || ||||||
guu ug auccuccg caaaacau cucccgguuuuaGCGUUGAAA CCUUU C AUc cccg uuuu acg ua uucgga u
caaugug a u a aaaauuaauccau A - U a u c u a uuuuauuuaucuacuuucggcu
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr3: 12779582-12779826 [+]
Database links
Mature mtr-miR5249-5p
| Accession | MIMAT0021245 |
| Description | Medicago truncatula mtr-miR5249-5p mature miRNA |
| Sequence | 11 - ACUUAGGGGGCAGUUUUGUAG - 31 |
| Evidence |
experimental
Illumina [1] |
Mature mtr-miR5249-3p
| Accession | MIMAT0055119 |
| Description | Medicago truncatula mtr-miR5249-3p mature miRNA |
| Sequence | 171 - UAUCUUUCCAAAAGUUGCG - 189 |
| Evidence |
experimental
unknown |
References
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