Stem-loop mtr-MIR5241b

Accession

MI0018341

Description

Medicago truncatula mtr-MIR5241b precursor miRNA

Literature search

1 open access papers mention mtr-MIR5241b
(1 sentences)

Sequence

6895 reads, 59.0 reads per million, 111 experiments

auuaaagUAUUGGGCUCAUUUUUGUucggucguaaugUGACUGAAUGGAAGAGUGCAUuggcuaaau
.....(((..((.((((..(((((((((((((.....))))))))))))))))).))...)))....

Structure

auuaa   -AU  G    AU             u 
     agU   UG GCUC  UUUUGUucggucg a
     |||   || ||||  ||||||||||||| a
     ucg   AC UGAG  AAGGUAAGUCAGU u
-uaaa   guU  G    --             g 

Annotation confidence Low

Genome context

chr6: 21088246-21088312 [-]

Mature mtr-miR5241b-5p

• Accession: MIMAT0055110
• Description: Medicago truncatula mtr-miR5241b-5p mature miRNA
• Sequence: 8 - UAUUGGGCUCAUUUUUGU - 25
• Evidence: experimental ; unknown

Mature mtr-miR5241b-3p

• Accession: MIMAT0021236
• Description: Medicago truncatula mtr-miR5241b-3p mature miRNA
• Sequence: 38 - UGACUGAAUGGAAGAGUGCAU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010