Accession
MI0018332
Description
Medicago truncatula
mtr-MIR5237 precursor miRNA
Sequence
5965
reads,
40.0
reads per million, 111 experiments
aauauuugaaguucaaacuauuuuuuuuuguuuuuguacgugaugauauaauguuaUUGAACAACUUUCUGAACUUUCAGgccacaagcuggagagauuaaaaagauuguucaaaauauaaugaauauauuggauuguaaaucuucauucauUUCAAAAGAUUUAGUUGGGAUaaauucucgga
..........((((.(((((...(((((((....((...((((.((((((((.(..((((((((((((.(((.(((((.(((.....))).))))).))).)))).))))))))((((((.....))))))).))))))..)).)))).))...)))))))..))))).))))...........
..........((((.(((((...(((((((....((...((((.((((((((.(..((((((((((((.(((.(((((.(((.....))).))))).))).)))).))))))))((((((.....))))))).))))))..)).)))).))...)))))))..))))).))))...........
Structure
-aauauuugaa a uuu uuuu uac u -- g ---------------ua - C A A c
guuc aacua uuuuuug ug guga ga uauaau u UUGAACAA CUUU UGA CUUUC Ggc a
|||| ||||| ||||||| || |||| || |||||| | |||||||| |||| ||| ||||| ||| c
UAGG UUGAU AGAAAAC ac uacu cu auguua g aacuuguu gaaa auu gagag ucg a
aggcucuuaaa G -UU -UUu --u u aa g uuauauaaguaauauaa a a a g a
Annotation confidence
Low
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Genome context
chr6: 21098236-21098419 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR5237
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR5237-5p
| Accession | MIMAT0055102 |
| Description | Medicago truncatula mtr-miR5237-5p mature miRNA |
| Sequence | 57 - UUGAACAACUUUCUGAACUUUCAG - 80 |
| Evidence |
experimental
unknown |
Mature mtr-miR5237-3p
| Accession | MIMAT0021227 |
| Description | Medicago truncatula mtr-miR5237-3p mature miRNA |
| Sequence | 153 - UUCAAAAGAUUUAGUUGGGAU - 173 |
| Evidence |
experimental
Illumina [1] |
References
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