Stem-loop mtr-MIR2592bg

Accession

MI0018310

Description

Medicago truncatula mtr-MIR2592bg precursor miRNA

Literature search

1 open access papers mention mtr-MIR2592bg
(2 sentences)

Sequence

16149 reads, 84.0 reads per million, 111 experiments

uaaauucauguuAGGCUGGUUUAGAUGAAGGUAuuaagugucaaggaaugaaccucauuucguuggcaauugaauaucaucAUCUAAAGCAAGCCUAACAAAAAUuu
.(((((..((((((((((.(((((((((.((((((...(((((((((((((...))))))).))))))....)))))).))))))))).).)))))))))..)))))

Structure

u     ca         - G         A      -aag      -       a 
 aaauu  uguuAGGCU G UUUAGAUGA GGUAuu    ugucaa ggaauga  
 |||||  ||||||||| | ||||||||| ||||||    |||||| ||||||| c
 uuUAA  ACAAUCCGA C AAAUCUAcu cuauaa    acgguu cuuuacu  
-     AA         A G         a      guua      g       c 

Annotation confidence Low

Genome context

chr7: 31785438-31785544 [+]

Mature mtr-miR2592bg-5p

• Accession: MIMAT0021204
• Description: Medicago truncatula mtr-miR2592bg-5p mature miRNA
• Sequence: 13 - AGGCUGGUUUAGAUGAAGGUA - 33
• Evidence: experimental ; Illumina [1]

Mature mtr-miR2592bg-3p

• Accession: MIMAT0055083
• Description: Medicago truncatula mtr-miR2592bg-3p mature miRNA
• Sequence: 82 - AUCUAAAGCAAGCCUAACAAAAAU - 105
• Evidence: experimental ; unknown

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010