Stem-loop mtr-MIR2592ax

Accession

MI0018301

Description

Medicago truncatula mtr-MIR2592ax precursor miRNA

Literature search

1 open access papers mention mtr-MIR2592ax
(2 sentences)

Sequence

10884 reads, 49.0 reads per million, 111 experiments

aauucuuguuAGGCUGGUUUAGAUGAAGGUAuuaagugacaaggaaugaaccucauuucguuggaACUUGAAUACCAUCAUCUAAAGCAaacccaacaaaaga
.....(((((.((.((.(((((((((.((((((((((..((((((((((...))))))).)))..))))).))))).))))))))).))..)).)))))....

Structure

aauuc     A  -C  G         A     -     ga   -       a 
     uuguu GG  UG UUUAGAUGA GGUAu uaagu  caa ggaauga  
     ||||| ||  || ||||||||| ||||| |||||  ||| ||||||| c
     aacaa cc  AC AAAUCUACU CCAUA GUUCA  guu cuuuacu  
-agaa     c  aa  G         A     A     ag   g       c 

Annotation confidence Medium

Genome context

chr2: 30989449-30989551 [-]

Mature mtr-miR2592ax-5p

• Accession: MIMAT0021195
• Description: Medicago truncatula mtr-miR2592ax-5p mature miRNA
• Sequence: 11 - AGGCUGGUUUAGAUGAAGGUA - 31
• Evidence: experimental ; Illumina [1]

Mature mtr-miR2592ax-3p

• Accession: MIMAT0055074
• Description: Medicago truncatula mtr-miR2592ax-3p mature miRNA
• Sequence: 66 - ACUUGAAUACCAUCAUCUAAAGCA - 89
• Evidence: experimental ; unknown

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010