Stem-loop mtr-MIR2592av

Accession

MI0018299

Description

Medicago truncatula mtr-MIR2592av precursor miRNA

Literature search

1 open access papers mention mtr-MIR2592av
(2 sentences)

Sequence

14881 reads, 74.0 reads per million, 111 experiments

aauucuuguuAGGCUGGUUUAGAUGAAGGUAguaagugccaaggaaugaaccucauuucguuggcacuugaauaCCAUCAUCUAAAGCAAGCCUAAcaaaaau
.....(((((((((((.(((((((((.((((.(((((((((((((((((...))))))).))))))))))..)))).))))))))).).))))))))))....

Structure

aauuc          - G         A    -g          -       a 
     uuguuAGGCU G UUUAGAUGA GGUA  uaagugccaa ggaauga  
     |||||||||| | ||||||||| ||||  |||||||||| ||||||| c
     aacAAUCCGA C AAAUCUACU CCau  guucacgguu cuuuacu  
-uaaa          A G         A    aa          g       c 

Annotation confidence High

Genome context

chr4: 17514821-17514923 [-]

Mature mtr-miR2592av-5p

• Accession: MIMAT0021193
• Description: Medicago truncatula mtr-miR2592av-5p mature miRNA
• Sequence: 11 - AGGCUGGUUUAGAUGAAGGUA - 31
• Evidence: experimental ; Illumina [1]

Mature mtr-miR2592av-3p

• Accession: MIMAT0055072
• Description: Medicago truncatula mtr-miR2592av-3p mature miRNA
• Sequence: 75 - CCAUCAUCUAAAGCAAGCCUAA - 96
• Evidence: experimental ; unknown

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010