Stem-loop mtr-MIR2592au

Accession

MI0018298

Description

Medicago truncatula mtr-MIR2592au precursor miRNA

Literature search

1 open access papers mention mtr-MIR2592au
(2 sentences)

Sequence

17951 reads, 98.0 reads per million, 111 experiments

auucuuguuAGGCUGGUUUAGAUGAAGGUAuuaagugucaaggaaugaaccucauuucguugucacuugaauaCCAUCAUCUAAAGCAAGCCUAAcaaaaau
....(((((((((((.(((((((((.(((((((((((.((((((((((...))))))).))).)))))).))))).))))))))).).))))))))))....

Structure

auuc          - G         A     -      u   -       a 
    uuguuAGGCU G UUUAGAUGA GGUAu uaagug caa ggaauga  
    |||||||||| | ||||||||| ||||| |||||| ||| ||||||| c
    aacAAUCCGA C AAAUCUACU CCaua guucac guu cuuuacu  
uaaa          A G         A     a      u   g       c 

Annotation confidence High

Genome context

chr3: 32690749-32690850 [+]

Mature mtr-miR2592au-5p

• Accession: MIMAT0021192
• Description: Medicago truncatula mtr-miR2592au-5p mature miRNA
• Sequence: 10 - AGGCUGGUUUAGAUGAAGGUA - 30
• Evidence: experimental ; Illumina [1]

Mature mtr-miR2592au-3p

• Accession: MIMAT0055071
• Description: Medicago truncatula mtr-miR2592au-3p mature miRNA
• Sequence: 74 - CCAUCAUCUAAAGCAAGCCUAA - 95
• Evidence: experimental ; unknown

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010