Stem-loop mtr-MIR2592at

Accession

MI0018297

Description

Medicago truncatula mtr-MIR2592at precursor miRNA

Literature search

1 open access papers mention mtr-MIR2592at
(2 sentences)

Sequence

13485 reads, 72.0 reads per million, 111 experiments

aauuuuuguuAGGCUGGUUUAGAUGAAGGUAuuaagugucaaggaauggaccucauuucguuggcacuugaauaCCAUCAUCUAAAGCAAGCCUAAcaaaaau
.(((((((((((((((.(((((((((.(((((((((((((((((((((.....)))))).)))))))))).))))).))))))))).).))))))))))))))

Structure

a              - G         A     -          -      g 
 auuuuuguuAGGCU G UUUAGAUGA GGUAu uaagugucaa ggaaug a
 |||||||||||||| | ||||||||| ||||| |||||||||| |||||| c
 uaaaaacAAUCCGA C AAAUCUACU CCaua guucacgguu cuuuac c
-              A G         A     a          g      u 

Annotation confidence High

Genome context

chr3: 36619674-36619776 [-]

Mature mtr-miR2592at-5p

• Accession: MIMAT0021191
• Description: Medicago truncatula mtr-miR2592at-5p mature miRNA
• Sequence: 11 - AGGCUGGUUUAGAUGAAGGUA - 31
• Evidence: experimental ; Illumina [1]

Mature mtr-miR2592at-3p

• Accession: MIMAT0055070
• Description: Medicago truncatula mtr-miR2592at-3p mature miRNA
• Sequence: 75 - CCAUCAUCUAAAGCAAGCCUAA - 96
• Evidence: experimental ; unknown

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010