miRBase entry: mtr-MIR5224b

Stem-loop mtr-MIR5224b


Accession
MI0018291
Description
Medicago truncatula mtr-MIR5224b precursor miRNA


Sequence

1576 reads, 15.0 reads per million, 105 experiments
cguuacaaacguccggucugagagCUUCCUCAUAUACCUCAAUCAUGUuuacagcagcgugguuCGGAAGAGGAUUGUCGAGGACAugcgggacgu
........((((((.((.((......((((((((..(((((((((((((......))))))))).....))))..))).))))))).)).))))))

Structure
cguuacaa      g  c  agagCU     -   UA    -----         ua 
        acgucc gu ug      UCCUC AUA  CCUC     AAUCAUGUu  c
        |||||| || ||      ||||| |||  ||||     |||||||||   
        ugcagg cg AC      AGGAG UGU  GGAG     uuggugcga  a
--------      g  u  ------     C   UA    AAGGC         cg 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
chr8: 21746299-21746394 [-]

Database links

Mature mtr-miR5224b-5p

Accession MIMAT0055064
Description Medicago truncatula mtr-miR5224b-5p mature miRNA
Sequence 25 - CUUCCUCAUAUACCUCAAUCAUGU - 48
Evidence experimental
unknown

Mature mtr-miR5224b-3p

Accession MIMAT0021185
Description Medicago truncatula mtr-miR5224b-3p mature miRNA
Sequence 65 - CGGAAGAGGAUUGUCGAGGACA - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010