miRBase entry: mtr-MIR5226

Stem-loop mtr-MIR5226


Accession
MI0018290
Description
Medicago truncatula mtr-MIR5226 precursor miRNA


Sequence

14103 reads, 140.0 reads per million, 106 experiments
uguuucaauuuuucUUUGUACAACUUGGAGGAUUCAuaagcuugauuccuuaucuUCUCUAACUCGUGCAUUCGAAGuuucccccu
......((((((....(((((...((((((((...(((((........))))).))))))))...)))))...)))))).......

Structure
-uguuuc      ucUU     AAC        UUC     cuu 
       aauuuu    UGUAC   UUGGAGGA   Auaag   g
       ||||||    |||||   ||||||||   |||||    
       uuGAAG    ACGUG   AAUCUCUu   uauuc   a
ucccccu      -CUU     CUC        --c     cuu 


Annotation confidence Low
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Genome context
chr7: 1430773-1430858 [-]

Database links

Mature mtr-miR5226-5p

Accession MIMAT0021184
Description Medicago truncatula mtr-miR5226-5p mature miRNA
Sequence 15 - UUUGUACAACUUGGAGGAUUCA - 36
Evidence experimental
Illumina [1]

Mature mtr-miR5226-3p

Accession MIMAT0055063
Description Medicago truncatula mtr-miR5226-3p mature miRNA
Sequence 56 - UCUCUAACUCGUGCAUUCGAAG - 77
Evidence experimental
unknown

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010