Accession
MI0018289
Description
Medicago truncatula
mtr-MIR5225a precursor miRNA
Sequence
776
reads,
7.0
reads per million, 104 experiments
uacacggacuUCAGUCGCAGGAGAGAUGACACcuucuguuucuaauggcaugguugcaaccaauuuuaacaggaguugucaucuuuCUUCGACUGAAGUCCAUAUGCAU
.....((((((((((((.(((((((((((((.((((((((.....(((..((....)).))).....)))))))).)))))))))))))))))))))))))........
.....((((((((((((.(((((((((((((.((((((((.....(((..((....)).))).....)))))))).)))))))))))))))))))))))))........
Structure
---uacac C C ucuaa ca g
ggacuUCAGUCG AGGAGAGAUGACA cuucuguu ugg ug u
|||||||||||| ||||||||||||| |||||||| ||| ||
CCUGAAGUCAGC UUCuuucuacugu gaggacaa acc ac u
UACGUAUA - u uuuua -a g
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr6: 2480844-2480952 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR5225a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR5225a-5p
| Accession | MIMAT0021183 |
| Description | Medicago truncatula mtr-miR5225a-5p mature miRNA |
| Sequence | 11 - UCAGUCGCAGGAGAGAUGACAC - 32 |
| Evidence |
experimental
Illumina [1] |
Mature mtr-miR5225a-3p
| Accession | MIMAT0055062 |
| Description | Medicago truncatula mtr-miR5225a-3p mature miRNA |
| Sequence | 87 - CUUCGACUGAAGUCCAUAUGCAU - 109 |
| Evidence |
experimental
unknown |
References
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