miRBase entry: mtr-MIR2586b

Stem-loop mtr-MIR2586b


Accession
MI0018278
Description
Medicago truncatula mtr-MIR2586b precursor miRNA


Sequence

3563 reads, 35.0 reads per million, 110 experiments
uuauaugugacggUGUCGUAUCGGUGUUGGACACGAcacguguccgacacugggaCACAUGUCGUGUCUGACAC
........(((((((((...(((((((((((((((...)))))))))))))))))))).))))((((...))))

Structure
---uuauaugu    -     GUA               A 
           gacg gUGUC   UCGGUGUUGGACACG  
           |||| |||||   ||||||||||||||| c
           CUGU CACag   ggucacagccugugc  
CACAGUCUGUG    A     ---               a 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
chr4: 37901671-37901744 [-]

Database links

Mature mtr-miR2586b-5p

Accession MIMAT0021172
Description Medicago truncatula mtr-miR2586b-5p mature miRNA
Sequence 14 - UGUCGUAUCGGUGUUGGACACGA - 36
Evidence experimental
Illumina [1]

Mature mtr-miR2586b-3p

Accession MIMAT0055053
Description Medicago truncatula mtr-miR2586b-3p mature miRNA
Sequence 56 - CACAUGUCGUGUCUGACAC - 74
Evidence experimental
unknown

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010