miRBase entry: mtr-MIR5208b

Stem-loop mtr-MIR5208b


Accession
MI0018247
Description
Medicago truncatula mtr-MIR5208b precursor miRNA


Sequence

9996 reads, 81.0 reads per million, 111 experiments
uuaugcuaguAACAUGGAUGUUGUGAGUUUGUUcauagauucauuccuuUUUGUUUUUAGCGAAUUUGa
....(((((.((((.(((.(..(((((((((....))))))))).).))).)))).)))))........

Structure
----uuau     u    U   U UU         U 
        gcuag AACA GGA G  GUGAGUUUG U
        ||||| |||| ||| |  |||||||||  
        CGAUU UUGU Uuu c  uacuuagau c
aGUUUAAG     U    U   c -u         a 


Annotation confidence Low
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Genome context
chr5: 3497460-3497528 [+]

Database links

Mature mtr-miR5208b-5p

Accession MIMAT0021140
Description Medicago truncatula mtr-miR5208b-5p mature miRNA
Sequence 11 - AACAUGGAUGUUGUGAGUUUGUU - 33
Evidence experimental
Illumina [1]

Mature mtr-miR5208b-3p

Accession MIMAT0055028
Description Medicago truncatula mtr-miR5208b-3p mature miRNA
Sequence 50 - UUUGUUUUUAGCGAAUUUG - 68
Evidence experimental
unknown

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010