miRBase entry: mtr-MIR5208a

Stem-loop mtr-MIR5208a


Accession
MI0018246
Description
Medicago truncatula mtr-MIR5208a precursor miRNA


Sequence

19917 reads, 162.0 reads per million, 111 experiments
uugaauacggucauauuagccauauuaguaggCAUAGGUACUUUGCCGUUUUAggcuauuAACAUGGAUGUUGUGAGUUUGUUcacag
.((((((.(.(((((.((.((((.(((((((.(...((((...))))......).))))))).)))).)).))))).).))))))...

Structure
--u      c g     u  g    a       g ---AUA    C 
   ugaaua g ucaua ua ccau uuaguag C      GGUA  
   |||||| | ||||| || |||| ||||||| |      |||| U
   acUUGU U AGUGU GU GGUA AAuuauc g      CCGU  
gac      U G     U  A    C       g AUUUUG    U 


Annotation confidence Low
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Genome context
AC151525.18: 13620-13707 [+]

Database links

Mature mtr-miR5208a-5p

Accession MIMAT0055027
Description Medicago truncatula mtr-miR5208a-5p mature miRNA
Sequence 33 - CAUAGGUACUUUGCCGUUUUA - 53
Evidence experimental
unknown

Mature mtr-miR5208a-3p

Accession MIMAT0021139
Description Medicago truncatula mtr-miR5208a-3p mature miRNA
Sequence 61 - AACAUGGAUGUUGUGAGUUUGUU - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010